Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_141911313_141912028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141911313 - 141912028

Intron Length:

716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACC

5'SS Class:

strong_major

3'SS Sequence:

TATCTATTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AAATCTTTAATT

Flanking Amino Acid:

VLKTIEKYVQSIHWREALNI

Intron Amino Acid Position:

2252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

81.2

30.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

78.5

0.64

0.8

70.6

39.8

Minor 5ss

36.4

-1.5

2.8

46.5

41.8

Minor BPS

75.3

0.87

1.1

80.52

Associated Gene:

Gene:

FRY

Ensembl Gene ID:

ENSAPLG00000006519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037869

141786354 - 141947171

160818

ENSAPLT00000035992

141756273 - 141947171

190899

ENSAPLT00000006897

141786354 - 141947171

160818