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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141914424_141915444_F


Intron Information:

Intron Rank:
49

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
141914424 - 141915444

Intron Length:
1021

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTAGC

5'SS Class:
major

3'SS Sequence:
CTTTGAATTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGAAT

U12 Branch Point Sequence:
ATCCTTTGAATT

Flanking Amino Acid:
QEVGLSKNPSVIFSSCGDLD

Intron Amino Acid Position:
2391

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1
70.3
40.5

Major BPS
74.6
0.61
1.4
84
34.5

Major PPT
73.5
0.53
0.9
67.2
38.1

Minor 5ss
38.3
-1.3
2.8
51.5
39

Minor BPS
54.2
0.21
1.4
67.89
37.4

Associated Gene:

Gene:
FRY

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

141786354 - 141947171
160818

141756273 - 141947171
190899

141786354 - 141947171
160818