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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141915616_141921330_F


Intron Information:

Intron Rank:
50

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
141915616 - 141921330

Intron Length:
5715

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGTAT

5'SS Class:
major

3'SS Sequence:
CATCCCATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCAAAT

U12 Branch Point Sequence:
CTGACCCTACAT

Flanking Amino Acid:
FLDVELEDGEGESMDNFNWG

Intron Amino Acid Position:
2448

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.1
69.1
38

Major BPS
68.5
0.46
1
73.3
28.9

Major PPT
74.7
0.56
0.9
70.3
34.5

Minor 5ss
36.7
-1.5
3.6
55.1
49.1

Minor BPS
44.9
-0.3
2.1
62.59
46.8

Associated Gene:

Gene:
FRY

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

141786354 - 141947171
160818

141756273 - 141947171
190899

141786354 - 141947171
160818