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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141927394_141933635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141927394 - 141933635

Intron Length:

6242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CTTTGTTTTACA

Flanking Amino Acid:

TFHVFSSLFKNIQKRFCFLT

Intron Amino Acid Position:

2687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

88.8

0.87

0.7

83.2

31.9

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

54.3

0.13

2.1

70.62

41.9

Associated Gene:

Gene:

FRY

Ensembl Gene ID:

ENSAPLG00000006519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037869

141786354 - 141947171

160818

ENSAPLT00000035992

141756273 - 141947171

190899

ENSAPLT00000006897

141786354 - 141947171

160818