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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141951695_141951848_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
141951695 - 141951848

Intron Length:
154

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGTGCAGT

5'SS Class:
major

3'SS Sequence:
AATCTCCCCACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAG

U12 Branch Point Sequence:
GTGACCCCAATC

Flanking Amino Acid:
AAPGRQAAFQFLEQKYGYFH

Intron Amino Acid Position:
202

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
70.5
41.4

Major BPS
52.2
0.06
1.6
51.1
46.3

Major PPT
70
0.45
0.9
62.3
33.7

Minor 5ss
41.7
-0.9
2.8
57.4
46.9

Minor BPS
46.8
-0.2
1.9
57.29
41.1

Associated Gene:

Gene:
ZAR1L

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

141950802 - 141952451
1650