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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141990047_141991237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141990047 - 141991237

Intron Length:

1191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTAATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTCTTTTTAATC

Flanking Amino Acid:

SGLYAADKSLISSSKMEIKY

Intron Amino Acid Position:

3177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.9

36.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.8

0.69

0.9

82.2

33.2

Minor 5ss

48.6

-0.1

2.8

64.8

41.1

Minor BPS

67.9

0.54

1.2

68.66

38.1

Associated Gene:

Gene:

BRCA2

Ensembl Gene ID:

ENSAPLG00000007774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008073

141955729 - 141991867

36139