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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142037007_142040539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142037007 - 142040539

Intron Length:

3533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGAATG

5'SS Class:

major

3'SS Sequence:

TTTTTCATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTACATGCACT

Flanking Amino Acid:

GDAHDWNQKRAQQAMEQGRS

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

69.3

41.1

Major BPS

100

1.24

0.5

100

Major PPT

90.5

0.91

0.7

85.9

26.9

Minor 5ss

39.5

-1.2

2.8

49.3

46.6

Minor BPS

49.4

0.04

2.2

79.3

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032678

142012255 - 142052202

39948