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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142160181_142161597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142160181 - 142161597

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTACA

5'SS Class:

major

3'SS Sequence:

TTTTTGGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGTAGCTTAAAA

Flanking Amino Acid:

EMKSFFTPGKPKAANVLGAV

Intron Amino Acid Position:

1125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

73.3

37.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

86.7

0.83

0.9

84.6

Minor 5ss

37.5

-1.4

2.4

43.2

Minor BPS

57.5

0.23

1.9

70.56

Associated Gene:

Gene:

PDS5B

Ensembl Gene ID:

ENSAPLG00000008377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008878

142087763 - 142169357

81595