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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14224155_14227019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14224155 - 14227019

Intron Length:

2865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTATGTTTAAAA

Flanking Amino Acid:

AQATGIESLEGVLQMMQTRI

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

73.1

0.58

79.6

29.1

Major PPT

89.2

0.88

0.7

84.2

30.3

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

0.34

1.8

73.34

38.4

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025877

14197051 - 14230123

33073

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312

ENSAPLT00000028517

14200748 - 14230123

29376