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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14228200_14228969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14228200 - 14228969

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

AAATCTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AACATCTAAATC

Flanking Amino Acid:

APALAELLADECYADFFRED

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

53.6

45.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

74.9

0.56

0.9

70.7

39.9

Minor 5ss

33.2

-1.9

40.9

44.9

Minor BPS

48.6

-0.1

1.6

53.86

38.3

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028517

14200748 - 14230123

29376

ENSAPLT00000025877

14197051 - 14230123

33073

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312