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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142353257_142354032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142353257 - 142354032

Intron Length:

776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCGTGGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

TTTCTCCCACCT

Flanking Amino Acid:

MIMECNKLFEVPHEMVTQSR

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

1.2

61.8

35.9

Major PPT

61.9

0.27

56.1

38.8

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

-0.1

2.1

74.26

42.3

Associated Gene:

Gene:

STARD13

Ensembl Gene ID:

ENSAPLG00000009841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041475

142345381 - 142489786

144406

ENSAPLT00000038347

142345381 - 142465929

120549

ENSAPLT00000025588

142345417 - 142634863

289447

ENSAPLT00000010296

142345417 - 142475238

129822