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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142355218_142358289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142355218 - 142358289

Intron Length:

3072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTGC

5'SS Class:

major

3'SS Sequence:

TGCTTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CTGCAATTAACC

Flanking Amino Acid:

LGETFLHIYQYVPKEQRLQA

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

71.3

35.3

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

80.7

0.69

0.8

75.8

32.8

Minor 5ss

37.5

-1.4

2.9

48.1

41.3

Minor BPS

50.4

-0

1.8

62.23

42.6

Associated Gene:

Gene:

STARD13

Ensembl Gene ID:

ENSAPLG00000009841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038347

142345381 - 142465929

120549

ENSAPLT00000025588

142345417 - 142634863

289447

ENSAPLT00000010296

142345417 - 142475238

129822

ENSAPLT00000041475

142345381 - 142489786

144406