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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142368552_142373765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142368552 - 142373765

Intron Length:

5214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGCTTTTAATG

Flanking Amino Acid:

KLDVNFQRKKSEDSDEEDLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.4

0.71

0.9

72.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

56.7

0.07

1.4

55.41

Associated Gene:

Gene:

STARD13

Ensembl Gene ID:

ENSAPLG00000009841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038347

142345381 - 142465929

120549

ENSAPLT00000025588

142345417 - 142634863

289447

ENSAPLT00000010296

142345417 - 142475238

129822

ENSAPLT00000041475

142345381 - 142489786

144406