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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142562611_142587947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142562611 - 142587947

Intron Length:

25337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGATTTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TAAGACTTAACG

Flanking Amino Acid:

DKEEKHMELETQPERGSEWS

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.4

32.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

75.5

0.57

0.9

73.7

41.5

Minor 5ss

30.8

-2.2

3.3

41.4

45.3

Minor BPS

59.7

0.17

1.7

62.8

44.3

Associated Gene:

Gene:

STARD13

Ensembl Gene ID:

ENSAPLG00000009841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025588

142345417 - 142634863

289447