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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142667435_142671277_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

142667435 - 142671277

Intron Length:

3843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATCTTCT

5'SS Class:

weak_minor

3'SS Sequence:

GCTTCGCGTTCAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

CTGTGGTTAACA

Flanking Amino Acid:

HNTSSLAVKTVQCGDFPHLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.2

65.4

41.1

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

69.3

0.44

65.4

41.1

Minor 5ss

67.3

0.58

1.9

77.1

37.9

Minor BPS

49.4

-0

2.4

66.48

46.2

Associated Gene:

Gene:

RFC3

Ensembl Gene ID:

ENSAPLG00000010374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041906

142667073 - 142679969

12897

ENSAPLT00000019250

142667073 - 142680052

12980