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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142670770_142671277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142670770 - 142671277

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

GCTTCGCGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

CTGTGGTTAACA

Flanking Amino Acid:

RQQAAQLRCLVQCGDFPHLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

69.3

0.44

65.4

41.1

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

49.4

-0

2.4

66.48

46.2

Associated Gene:

Gene:

RFC3

Ensembl Gene ID:

ENSAPLG00000010374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010823

142670675 - 142680052

9378