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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142675036_142675678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142675036 - 142675678

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TACCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTCTTTTTACCC

Flanking Amino Acid:

LETSTQRDFKVVLLTEVDKL

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

82.8

0.74

0.8

80.3

31.3

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

64.1

0.42

1.6

72.92

38.9

Associated Gene:

Gene:

RFC3

Ensembl Gene ID:

ENSAPLG00000010374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041906

142667073 - 142679969

12897

ENSAPLT00000019250

142667073 - 142680052

12980

ENSAPLT00000010823

142670675 - 142680052

9378