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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142676448_142678076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

142676448 - 142678076

Intron Length:

1629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATGAG

5'SS Class:

major

3'SS Sequence:

GTTTTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTCAGCTTAACC

Flanking Amino Acid:

NAIVSQQTPQRLLEVRGRLY

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

65.6

40.5

Major BPS

0.72

38.9

Major PPT

78.6

0.64

0.9

74.4

35.3

Minor 5ss

-2.3

3.4

39.1

46.7

Minor BPS

58.4

0.24

1.9

66.76

Associated Gene:

Gene:

RFC3

Ensembl Gene ID:

ENSAPLG00000010374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041906

142667073 - 142679969

12897

ENSAPLT00000019250

142667073 - 142680052

12980

ENSAPLT00000010823

142670675 - 142680052

9378