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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142696588_142702909_R

Intron Information:

Intron Rank:

131826

Intron Class:

major

Intron Phase:

Intron Coordinates:

142696588 - 142702909

Intron Length:

6322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TGTACCCAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

90.5

0.91

0.6

84.8

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

47.3

-0.3

2.1

57.73

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017873

142696348 - 142702996

6649