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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142700816_142701495_R

Intron Information:

Intron Rank:

131830

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

142700816 - 142701495

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TGGATATATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTTACTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

54.4

0.1

1.2

53.2

44.5

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

0.69

1.7

85.21

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027861

142696348 - 142702949

6602