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Intron Name: Anas_platyrhynchos_platyrhynchos_1_142941633_142943266_R

Intron Information:

Intron Rank:

131562

Intron Class:

major

Intron Phase:

Intron Coordinates:

142941633 - 142943266

Intron Length:

1634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TATTTCTGTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

87.9

29.3

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

81.3

0.7

0.8

79.7

32.2

Minor 5ss

47.5

-0.2

2.8

66.5

37.9

Minor BPS

56.9

0.3

1.8

77.52

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045852

142940907 - 142945320

4414

ENSAPLT00000033440

142940907 - 142943729

2823