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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14294560_14295040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14294560 - 14295040

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAG

5'SS Class:

strong_major

3'SS Sequence:

TCATGATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATGATTT

Flanking Amino Acid:

TLTFLVGILQVIFGVLQIGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

35.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.5

0.57

65.9

44.2

Minor 5ss

36.6

-1.5

3.1

46.6

48.7

Minor BPS

50.2

0.08

73.98

Associated Gene:

Gene:

SLC26A4

Ensembl Gene ID:

ENSAPLG00000008089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017724

14293590 - 14307651

14062

ENSAPLT00000008424

14290753 - 14307651

16899