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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14295206_14297820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14295206 - 14297820

Intron Length:

2615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATTT

Flanking Amino Acid:

NYNGVLSIIYTLIETFERIG

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.3

81.8

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.8

0.99

0.6

92.5

25.7

Minor 5ss

40.7

-1

2.8

50.8

Minor BPS

58.4

0.34

1.5

71.47

40.5

Associated Gene:

Gene:

SLC26A4

Ensembl Gene ID:

ENSAPLG00000008089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017724

14293590 - 14307651

14062

ENSAPLT00000008424

14290753 - 14307651

16899