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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14298165_14299120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14298165 - 14299120

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTAAATGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TATTTTCTAAAT

Flanking Amino Acid:

NAGIVKSIPRGFLPPEPPDV

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

62.7

0.29

1.1

43.4

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

58.8

0.36

1.7

78.84

36.9

Associated Gene:

Gene:

SLC26A4

Ensembl Gene ID:

ENSAPLG00000008089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008424

14290753 - 14307651

16899

ENSAPLT00000017724

14293590 - 14307651

14062