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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14299269_14301667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14299269 - 14301667

Intron Length:

2399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTATA

5'SS Class:

strong_major

3'SS Sequence:

AATTACCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATCCAATTACCT

Flanking Amino Acid:

KYDYAIDGNQEFIAFGISNI

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.3

29.4

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

0.58

0.9

71.1

39.6

Minor 5ss

38.2

-1.3

45.5

Minor BPS

46.3

-0.2

66.26

43.7

Associated Gene:

Gene:

SLC26A4

Ensembl Gene ID:

ENSAPLG00000008089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017724

14293590 - 14307651

14062

ENSAPLT00000008424

14290753 - 14307651

16899