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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143644145_143649893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143644145 - 143649893

Intron Length:

5749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

TCTCTCTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

ATCCACTGAGTT

Flanking Amino Acid:

STAAGVSVIALDHGFTIKRS

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

70.3

40.5

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

77.2

0.61

0.9

76.3

32.3

Minor 5ss

46.1

-0.4

2.9

66.8

Minor BPS

45.6

-0.2

1.8

62.1

41.7

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018643

143634500 - 143697502

63003

ENSAPLT00000010329

143634500 - 143868192

233693