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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143657491_143659790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143657491 - 143659790

Intron Length:

2300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TGTTCTTCAAAA

Flanking Amino Acid:

YWDNVSDSAKELITMMLQVD

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

78.2

0.7

79.9

32.6

Major PPT

81.7

0.71

0.8

31.6

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

63.3

0.42

1.6

73.98

37.3

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033771

143634030 - 143868192

234163

ENSAPLT00000028232

143634030 - 143868192

234163

ENSAPLT00000018643

143634500 - 143697502

63003

ENSAPLT00000010329

143634500 - 143868192

233693