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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143659888_143660525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143659888 - 143660525

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGACT

5'SS Class:

major

3'SS Sequence:

TTTTACTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTTTACA

Flanking Amino Acid:

ILLCGFPPFRGSGDDQEVLF

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

68.7

41.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

89.9

0.9

0.7

84.3

30.3

Minor 5ss

40.6

-1.1

3.1

49.9

46.2

Minor BPS

0.65

1.8

84.87

34.2

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010329

143634500 - 143868192

233693

ENSAPLT00000033771

143634030 - 143868192

234163

ENSAPLT00000028232

143634030 - 143868192

234163

ENSAPLT00000018643

143634500 - 143697502

63003