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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143665761_143671343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143665761 - 143671343

Intron Length:

5583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TGTTGCTTACAT

Flanking Amino Acid:

ELYLVMELVKGGDLFDAITS

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

78.3

0.64

0.9

69.6

41.3

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

54.1

0.21

2.2

77.97

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028232

143634030 - 143868192

234163

ENSAPLT00000018643

143634500 - 143697502

63003

ENSAPLT00000010329

143634500 - 143868192

233693

ENSAPLT00000033771

143634030 - 143868192

234163