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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143671464_143673093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143671464 - 143673093

Intron Length:

1630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TAGTCATTAAAG

Flanking Amino Acid:

IIKKSKCRGKEHMIQNEVSI

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

0.67

1.1

77.7

37.1

Major PPT

0.58

1.1

72.9

42.2

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

58.6

0.13

1.8

63.53

43.5

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033771

143634030 - 143868192

234163

ENSAPLT00000028232

143634030 - 143868192

234163

ENSAPLT00000018643

143634500 - 143697502

63003

ENSAPLT00000010329

143634500 - 143868192

233693