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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143673152_143678270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143673152 - 143678270

Intron Length:

5119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTCAATGTAATT

Flanking Amino Acid:

NFAIVKECIERSTGREYALK

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

88.9

0.88

0.6

88.5

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

47.2

-0.1

2.1

68.97

42.6

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028232

143634030 - 143868192

234163

ENSAPLT00000018643

143634500 - 143697502

63003

ENSAPLT00000010329

143634500 - 143868192

233693

ENSAPLT00000033771

143634030 - 143868192

234163