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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143690772_143696477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143690772 - 143696477

Intron Length:

5706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTCATCTTACAG

Flanking Amino Acid:

TSPGSLRKQRDLYRPLSSDD

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.8

0.74

0.8

76.1

32.2

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

-0.2

1.8

56.61

44.8

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044267

143689294 - 143868192

178899