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Intron Name: Anas_platyrhynchos_platyrhynchos_1_143696573_143708331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

143696573 - 143708331

Intron Length:

11759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

GTTGTCCTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTTTTTCAATT

Flanking Amino Acid:

RSKSPASTSSVNGTPGSQLS

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

38.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.4

0.62

0.8

74.3

36.5

Minor 5ss

29.4

-2.4

3.3

37.9

46.9

Minor BPS

66.9

0.61

1.4

81.89

33.7

Associated Gene:

Gene:

DCLK1

Ensembl Gene ID:

ENSAPLG00000009916

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044267

143689294 - 143868192

178899

ENSAPLT00000033771

143634030 - 143868192

234163

ENSAPLT00000028232

143634030 - 143868192

234163

ENSAPLT00000010329

143634500 - 143868192

233693