Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14374594_14375680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14374594 - 14375680

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGAA

5'SS Class:

major

3'SS Sequence:

GTTGTGACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

CTTCCCTTACGT

Flanking Amino Acid:

IGAGVIGVELGSVWQRLGAD

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

0.9

69.2

30.2

Major BPS

68.1

0.45

73.5

28.6

Major PPT

70.9

0.47

63.1

42.9

Minor 5ss

24.4

-2.9

3.1

25.9

38.1

Minor BPS

57.4

0.31

77.02

45.4

Associated Gene:

Gene:

DLD

Ensembl Gene ID:

ENSAPLG00000009964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010418

14367909 - 14379816

11908