Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14387041_14387795_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14387041 - 14387795

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAAAACC

5'SS Class:

weak_major

3'SS Sequence:

GTGCATCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CTTTACTCACAT

Flanking Amino Acid:

LIKQIRDFLMQDSADLDSIE

Intron Amino Acid Position:

1508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.3

56.7

40.9

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

0.43

0.9

62.4

39.4

Minor 5ss

-1.7

40.4

38.5

Minor BPS

47.3

-0.1

2.1

70.58

45.7

Associated Gene:

Gene:

LAMB1

Ensembl Gene ID:

ENSAPLG00000010460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045321

14383082 - 14466920

83839

ENSAPLT00000010969

14383082 - 14423131

40050