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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14394046_14402049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14394046 - 14402049

Intron Length:

8004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCACCCTCACCT

Flanking Amino Acid:

FWGDPGVECRACDCNPRGIQ

Intron Amino Acid Position:

1126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

80.2

0.68

0.9

77.3

31.4

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

-0

1.9

62.42

47.1

Associated Gene:

Gene:

LAMB1

Ensembl Gene ID:

ENSAPLG00000010460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045321

14383082 - 14466920

83839

ENSAPLT00000010969

14383082 - 14423131

40050