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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144002816_144003455_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144002816 - 144003455

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTCTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTTCTTTTGAAG

Flanking Amino Acid:

LVGTAAILLAAKYEEIYPPE

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.3

72.2

39.5

Major BPS

75.6

0.64

1.5

34.5

Major PPT

77.8

0.63

79.1

33.2

Minor 5ss

34.1

-1.8

3.4

44.6

43.6

Minor BPS

56.6

0.06

1.5

64.42

37.4

Associated Gene:

Gene:

CCNA1

Ensembl Gene ID:

ENSAPLG00000009813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010211

144000293 - 144005948

5656