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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144003661_144004428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144003661 - 144004428

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTGCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTCTATTTGATT

Flanking Amino Acid:

VCIRTKNFAKYLAELSLLEA

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

83.7

0.76

0.8

83.9

31.1

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

64.2

0.53

1.5

79.4

37.2

Associated Gene:

Gene:

CCNA1

Ensembl Gene ID:

ENSAPLG00000009813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010211

144000293 - 144005948

5656