Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14404100_14404506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14404100 - 14404506

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGTA

5'SS Class:

major

3'SS Sequence:

CCCCACTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCTAT

U12 Branch Point Sequence:

TTGTACCCCACT

Flanking Amino Acid:

RDHTAGHNCERCEAGYYGDP

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

Major BPS

53.6

0.09

1.4

52.4

44.8

Major PPT

62.3

0.28

0.9

56.2

33.2

Minor 5ss

42.4

-0.8

3.1

58.1

46.4

Minor BPS

-0.3

2.4

70.14

46.1

Associated Gene:

Gene:

LAMB1

Ensembl Gene ID:

ENSAPLG00000010460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045321

14383082 - 14466920

83839

ENSAPLT00000010969

14383082 - 14423131

40050