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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14404972_14405123_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14404972 - 14405123

Intron Length:
152

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAT|GTACGTAGC

5'SS Class:
major

3'SS Sequence:
TCTCTCTTCCTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAC

U12 Branch Point Sequence:
TGCTCCCTAATG

Flanking Amino Acid:
ISALLHETALSCQCDPQGSL

Intron Amino Acid Position:
766

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
69.3
41.6

Major BPS
85
0.87
0.8
85.6
23

Major PPT
79.4
0.66
0.7
72.9
31.9

Minor 5ss
37.4
-1.4
3
49.6
40

Minor BPS
60.6
0.2
1.8
64.84
43.1

Associated Gene:

Gene:
LAMB1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14383082 - 14466920
83839

14383082 - 14423131
40050