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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14412469_14412867_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14412469 - 14412867

Intron Length:
399

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTGAGTAAA

5'SS Class:
major

3'SS Sequence:
TTTCCCCATCTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
TGTGTTTTGACC

Flanking Amino Acid:
LSADDPAGCQSCACNPLGTH

Intron Amino Acid Position:
451

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1.1
72.3
34.3

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
74.6
0.55
0.8
67.2
34.3

Minor 5ss
31.6
-2.1
2.7
34
41.5

Minor BPS
62.1
0.36
1.4
69.34
36.6

Associated Gene:

Gene:
LAMB1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14383082 - 14423131
40050

14383082 - 14466920
83839