Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14413865_14415152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14413865 - 14415152

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAATATT

5'SS Class:

major

3'SS Sequence:

TTTTTAATGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATG

Flanking Amino Acid:

EGFDEEVEGMVHGHCMCRHN

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

30.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.7

0.62

74.2

39.4

Minor 5ss

35.7

-1.6

3.1

47.6

42.5

Minor BPS

67.7

0.42

1.2

65.81

36.4

Associated Gene:

Gene:

LAMB1

Ensembl Gene ID:

ENSAPLG00000010460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045321

14383082 - 14466920

83839

ENSAPLT00000010969

14383082 - 14423131

40050