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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144196978_144201736_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144196978 - 144201736

Intron Length:

4759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

GATGCTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GGTCCTTTGATG

Flanking Amino Acid:

MCTIRMSFVKGWGAEYHRQD

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

72.3

0.5

0.9

40.5

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

57.1

0.08

1.3

57.35

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009523

144196745 - 144232359

35615