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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144201994_144206431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144201994 - 144206431

Intron Length:

4438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

GGAATAATATCT

Flanking Amino Acid:

IENTRRHIGKGVHLYYVGGE

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

69.5

0.44

1.7

77.2

37.1

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

39.8

-0.6

1.9

53.61

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009135

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009523

144196745 - 144232359

35615