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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14422967_14423106_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14422967 - 14423106

Intron Length:
140

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAACCACC

5'SS Class:
major

3'SS Sequence:
CCCGGCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCCCAC

U12 Branch Point Sequence:
TGTCTCCCACCC

Flanking Amino Acid:
MGLLPLYLALWVAAAQEP

Intron Amino Acid Position:
9

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67
0.4
1.2
61
44

Major BPS
50
0
1.2
61.8
35.9

Major PPT
61.6
0.26
0.9
53.4
31.1

Minor 5ss
46.7
-0.3
2.6
62.9
41.4

Minor BPS
43.3
-0.5
2
57.52
40.7

Associated Gene:

Gene:
LAMB1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14383082 - 14423131
40050