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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144271363_144272361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144271363 - 144272361

Intron Length:

999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTGACT

Flanking Amino Acid:

NRGKGGAVRMGVFISRGKTI

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

81.6

31.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.9

0.7

0.9

74.6

39.4

Minor 5ss

37.6

-1.4

2.8

48.3

41.8

Minor BPS

0.84

1.5

92.11

29.8

Associated Gene:

Gene:

ALG5

Ensembl Gene ID:

ENSAPLG00000009011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009395

144248915 - 144277248

28334