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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144273793_144274434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144273793 - 144274434

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTA

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGAAAT

U12 Branch Point Sequence:

ATTGGATGAAAT

Flanking Amino Acid:

EAMDFLEKRQKQDPSFTYEV

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

78.6

Major BPS

58.4

0.21

1.2

38.7

Major PPT

81.4

0.71

0.9

86.5

24.9

Minor 5ss

49.9

-0

2.4

67.2

43.9

Minor BPS

43.6

-0.4

2.2

65.98

Associated Gene:

Gene:

ALG5

Ensembl Gene ID:

ENSAPLG00000009011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009395

144248915 - 144277248

28334