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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144275877_144276837_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144275877 - 144276837

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGCT

5'SS Class:

major

3'SS Sequence:

TTTTTTATCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATCA

Flanking Amino Acid:

AAFLLLLLLLICVIAHVTAI

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

70.4

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.7

0.87

0.7

84.6

28.6

Minor 5ss

27.8

-2.6

3.3

36.6

41.5

Minor BPS

65.6

0.49

1.5

74.08

38.4

Associated Gene:

Gene:

ALG5

Ensembl Gene ID:

ENSAPLG00000009011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009395

144248915 - 144277248

28334