Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_144289426_144293039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144289426 - 144293039

Intron Length:

3614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AGTTTGGTAATA

Flanking Amino Acid:

SNLRPLNLLQGSDQGPSNQD

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

28.2

Major BPS

100

1.24

0.5

100

Major PPT

73.5

0.53

69.4

41.5

Minor 5ss

34.4

-1.8

3.3

49.3

46.9

Minor BPS

45.1

-0.3

2.5

61.51

39.3

Associated Gene:

Gene:

SUPT20H

Ensembl Gene ID:

ENSAPLG00000007566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022326

144287544 - 144321697

34154

ENSAPLT00000007873

144287544 - 144321697

34154

ENSAPLT00000031846

144287544 - 144321697

34154