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Intron Name: Anas_platyrhynchos_platyrhynchos_1_144293096_144295465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144293096 - 144295465

Intron Length:

2370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTTCTTTAACA

Flanking Amino Acid:

PAAMQSASQAGSPFGLKNAS

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

1.1

77.3

37.8

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

87.5

0.84

0.8

84.9

28.4

Minor 5ss

32.7

-2

3.1

40.9

45.4

Minor BPS

92.1

1.32

0.7

95.26

19.9

Associated Gene:

Gene:

SUPT20H

Ensembl Gene ID:

ENSAPLG00000007566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022326

144287544 - 144321697

34154

ENSAPLT00000007873

144287544 - 144321697

34154

ENSAPLT00000031846

144287544 - 144321697

34154